Figure 2
The power using SNPs with different minor allele frequencies with α = 80% and β = 10%. The SNP density is set as one SNP per kilobase. The power is obtained using two-locus haplotype data. In each bin (i.e., for each minor allele frequency), it shows the power using (from left to right): (1) all SNPs for block partitioning and tag SNP selection; (2) tag SNPs identified by the haplotype data; (3) the same number of random SNPs as in set 2; (4) tag SNPs identified by the genotype data; (5) the same number of random SNPs as in set 4.
