Two Methods of Whole-Genome Amplification Enable Accurate Genotyping Across a 2320-SNP Linkage Panel

Table 3A.

Summary of Call Rates and Genotyping Concordance for Genomic and MDA Amplified DNA


Genotyping summary (Gen Call score >0.1)

Genomic DNA
MDA DNA
Assays Run 23,200 23,200
Calls Made 22,808 22,720
Call Rate 98.31% 97.93%
Concordance
99.86%
  • Ten samples were analyzed at 2320 sites each. All data were pooled, as there was no significant difference in number of calls made or concordance between samples.

This Article

  1. Genome Res. 14: 901-907

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