Table 2B.
OmniPlex Amplification
|
gDNA source |
gDNA concordance (%) |
WGA concordance (%) |
gDNA:WGA concordance (%) |
|---|---|---|---|
| 1 and 4 | 100 | 99.96 | 99.88 |
| 2 and 8 | 99.99 | 99.91 | 99.86 |
| 3 and 9 | 100 | 99.93 | 99.92 |
| 5 and 7 | 99.98 | 99.96 | 99.88 |
| 6 and 10
|
99.99
|
99.97
|
99.92
|
-
Genotyping concordance between genomic and OmniPlex amplified DNA. Values in the gDNA column are concordance rates between each replicate pair (two samples). Values in the WGA column are concordance rates between the amplified products of a gDNA replicate pair (two samples). Values in the gDNA:WGA column are the average concordance of four comparisons of gDNA with amplification product, where both gDNA samples are compared with both related amplification products. Assays with GenCall scores >0.1 are included (assay call rate >98%).
