Comparison Between BAC-End Sequence Coordinates and In Silico or Neighborhood
|
|
Paired end sequence 82,813 |
Single end sequence 54,293 |
None 52,583 |
||||
|---|---|---|---|---|---|---|---|
| Coordinate type |
Total |
Correlationa |
Total |
Correlationa,b |
Total |
||
| In silico anchor | |||||||
| 157,473 | 73,305 | 70,944/900/1461 (97%/1%/2%) | 45,102 | 17,850/25,133/2119 (40%/55%/5%) | 39,066 | ||
| Neighborhood only | |||||||
| 21,976 | 6257 | 5831/50/376 (93%/1%/6%) | 6876 | 5862/379/635 (85%/6%/9%) | 8843 | ||
| None | |||||||
| 10,240c
|
3251
|
|
2315
|
|
4674
|
||
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Only clones in the map are listed here. Paired end sequence coordinates located on different chromosomes or >500 kb apart on the same chromosome have been removed.
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↵a Categories are the number of clones with overlapping coordinates/number clones with nonoverlapping coordinates/number of clones with coordinates on different chromosomes. The percentages for each category, calculated as end sequence versus in silico mapping or end sequence versus neighborhood, are given in parentheses
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↵b An in silico anchor was considered to be nonoverlapping with a single end sequence coordinate if it fell outside of the bounds of the in silico anchor
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↵c 9895 of these are singletons
