Integrated and Sequence-Ordered BAC- and YAC-Based Physical Maps for the Rat Genome

Table 3.

Fingerprint Map Statistics for the Automated Assembly, Manually Edited Map, and Final Merged Map


Map

Contigs

Clones in contigs

Singletons

Mean contig sizea

Median contig sizea

Largest contigb
Automated assemblyb 11,274 171,297 13,142 15 10 425
Manually edited 634 176,171 13,518 278 (4.6 Mb) 133 (2.7 Mb) 3990 (57.2 Mb)
Final merged
376
179,794
9895
453 (8.4 Mb)
172 (4.4 Mb)
4179 (60.9 Mb)
  • a As determined by the number of clones in the contig. The length of the contig is given in parentheses

  • b This assembly contained only CHORI-230 clones

This Article

  1. Genome Res. 14: 766-779

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