Integration of the Rat Recombination and EST Maps in the Rat Genomic Sequence and Comparative Mapping Analysis With the Mouse Genome

Table 1A.

Outlined Description of the Genetic Map in the (GK × BN) F2 Cross and Integration of Linkage and In Silico Maps of the Rat Autosomes


RNO

Markersa

Resolved positions

Average (cM)a

Average (Mb)a

In silico mappingb

Average (Mb)b
   1 333 103 1.52 2.63 263 1.02
   2 192 90 1.26 2.90 150 1.73
   3 110 64 1.97 2.71 91 1.90
   4 159 69 1.67 2.76 115 1.64
   5 172 69 1.45 2.55 132 1.32
   6 102 48 1.47 3.14 81 1.85
   7 104 58 1.66 2.51 77 1.88
   8 108 56 1.64 2.35 86 1.52
   9 75 41 2.11 2.84 52 2.23
10 128 92 1.57 1.22 98 1.14
11 40 24 2.94 3.82 34 2.66
12 50 26 1.95 1.87 34 1.41
13 78 33 2.02 3.48 55 2.06
14 72 34 2.15 3.40 53 2.16
15 53 34 2.63 3.33 44 2.55
16 45 24 2.78 3.92 36 2.58
17 92 44 1.54 2.26 78 1.26
18 59 31 1.81 2.91 44 2.03
19 41 26 1.98 2.37 30 2.04
20 45 30 2.41 1.91 31 1.84
Total
2058
996
1.77
2.57
1584
1.62
  • a Number of microsatellite markers mapped in the (GK × BN) F2 cross and average spacing between resolved genetic positions. Average physical distances were calculated with the chromosome length determined in the June 2003 rat genome assembly

  • b Markers localized in the genetic map (GK × BN) F2 cross that could be mapped by ePCR and average physical distances calculated as described above

This Article

  1. Genome Res. 14: 758-765

Preprint Server