High-Density Rat Radiation Hybrid Maps Containing Over 24,000 SSLPs, Genes, and ESTs Provide a Direct Link to the Rat Genome Sequence

Table 1.

Summary of Rat RH V3.4 Maps


Chromosome

Framework length (cR3000)

# Framework markers

Placement length (cR3000)

# Total markers

Genome sequence lengtha(Mb)

# STSs per cR3000

cR3000/Mb

# STSs per Mb

Av. bin size (cR3000)

Av. bin size (Mb)
   1 1681 98 1722 2951 268.12 1.7 6.42 11.0 17.6 2.74
   2 1620 119 1663 1960 258.22 1.2 6.44 7.6 14.0 2.17
   3 1519 89 1565 1639 170.97 1.0 9.15 9.6 17.6 1.92
   4 1094 74 1134 1690 187.37 1.5 6.05 9.0 15.3 2.53
   5 1182 81 1206 1823 173.11 1.5 6.97 10.5 14.9 2.14
   6 924 57 954 1277 147.64 1.3 6.46 8.6 16.7 2.59
   7 1090 74 1136 1591 143.08 1.4 7.94 11.1 15.4 1.93
   8 1358 82 1358 1622 129.06 1.2 10.52 12.6 16.6 1.57
   9 880 57 908 897 113.65 1.0 7.99 7.9 15.9 1.99
10 1214 67 1214 1190 110.73 1.0 10.96 10.7 18.1 1.65
11 704 40 733 706 87.80 1.0 8.35 8.0 18.3 2.20
12 794 48 823 789 46.65 1.0 17.64 16.9 17.1 0.97
13 770 38 800 831 111.35 1.0 7.18 7.5 21.1 2.93
14 782 41 826 682 112.22 0.8 7.36 6.1 20.1 2.74
15 743 48 791 721 109.77 0.9 7.21 6.6 16.5 2.29
16 789 45 820 850 90.22 1.0 9.09 9.4 18.2 2.00
17 833 51 879 901 97.31 1.0 9.03 9.3 17.2 1.91
18 832 51 852 775 87.34 0.9 9.76 8.9 16.7 1.71
19 726 41 754 627 59.22 0.8 12.73 10.6 18.4 1.44
20 517 22 562 594 55.30 1.1 10.17 10.7 25.6 2.51
X 941 42 990 321 160.78 0.3 6.16 2.0 23.6 3.83
Total 20991 1265 21688 24437 2719.92 - - - - -
Average (Autosome)
-
-
-
-
-
1.1
8.87
9.6
17.6
2.10
  • a Genome lengths according to Release 3.1 (RGSPC)

This Article

  1. Genome Res. 14: 750-757

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