Identification of Candidate Disease Genes by EST Alignments, Synteny, and Expression and Verification of Ensembl Genes on Rat Chromosome 1q43-54

Table 3.

Genes with Significant Increase in Differential Expression as Well as High Specificity to One Organ in the Electronic Northern Evaluation


Gene ID

Microarray

Electronic northern

Number of clones
INCY:3590992 LIVER Liver 7
INCY:3591185 OVARY Ovary 15
INCY:3591223 BRAIN Brain 23
INCY:3591251 - Brain 9
INCY:3591252 - Brain 3
INCY:3591272 LUNG Lung 8
INCY:3591277 - Kidney 11
INCY:3591280 - Liver 3
INCY:3591289 - Kidney 10
INCY:3591292 - Liver 63
INCY:3591460 - Kidney 17
INCY:3591461 OVARY - 0
INCY:3591465 - Bones 5
INCY:3591472 BLADDER/Lung -/- 0/2
INCY:3591479 MUSCLE - 1
INCY:3591480 KIDNEY Kidney 7
INCY:3591484 - Liver 3
INCY:3591486 TESTIS/- Testis/Brain 3/13
INCY:3591488 KIDNEY Kidney 35
INCY:3591555 MUSCLE/TONGUE/- Muscle/-/Kidney 4/1/25
INCY:3591558 - Brain 4
INCY:3591587 - Intestine 3
INCY:3591616 LIVER/KIDNEY Liver/- 5/1
INCY:3591631 STOMACH Stomach 5
INCY:3591768 LUNG/BLADDER/- -/-/Esophagus 0/0/3
INCY:3591769 LUNG - 1
INCY:3591989 HEART - 2
INCY:3591991 - Ear 3
INCY:3592018 STOMACH/BLADDER -/- 1/1
INCY:3592074 - Liver 118
INCY:3592077 - Liver 313
INCY:3592078 - Liver 19
INCY:3592088 HEART/LIVER -/- 0/1
INCY:3592109 - Liver 163
INCY:3592110 - Liver 357
INCY:3592111 - Liver 3
INCY:3592113 - Liver 16
INCY:3592114 LIVER Liver 3
INCY:3592125 - Liver 3
INCY:3592127 PROSTATE/OVARY/BRAIN/ADRENAL Prostate/Ovary/Brain/- 13/5/197/1
INCY:3592129 TRACHEA/LIVER Trachea/Liver 11/43
INCY:3592144 - Liver 5
INCY:3592150 - Salivary Glands 3
INCY:3592218 - Kidney 13
INCY:3592225 HEART Heart 8
INCY:3592281 LIVER/- Liver/Kidney 41/11
INCY:3592284 LIVER/- Liver/Kidney 8/10
INCY:3592285 STOMACH Stomach 4
INCY:3592296 TESTIS/- -/Kidney 2/11
INCY:3592298 SALIVARY GLANDS/- -/Lung 0/6
INCY:3592299 - Spinal Cord 5
INCY:3592340 - Kidney 16
INCY:3592388 PANCREAS/- -/Liver 0/9
INCY:3592445 BRAIN/- Brain/Spinal Cord 4/21
INCY:3592487 - Brain 5
INCY:3592613 STOMACH - 2
INCY:3592766 BRAIN Brain 4
INCY:3592789 BRAIN Brain 9
INCY:3592927 LIVER Liver 100
INCY:3592950 HEART/BLADDER/- Heart/Bladder/Kidney 6/4/7
INCY:3592983 LIVER/- Liver/Kidney 325/65
INCY:3592984 LIVER/- Liver/Kidney 245/13
INCY:3593074 PITUITARY/OVARY/SALIVARY GLAND/ADRENAL Pituitary/-/-/- 4/0/1/1
INCY:3593080 MUSCLE - 0
INCY:3593083 LIVER/- Liver/Kidney 226/7
INCY:3593093 LIVER - 1
INCY:3593141
LIVER
Liver
328

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  1. Genome Res. 14: 640-650

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