Table 5.
Protein Context of Insertion and Deletion Events
|
|
Background (% neighboring residues) |
Ins (%) |
Del (%) |
Total events (%) |
|---|---|---|---|---|
| Low complexity (Seg) | 8.80 | 28.94 | 26.40 | 27.48 |
| Transmembrane | 5.13 | 0.94 | 0.80 | 0.86 |
| Coiled coil | 2.69 | 3.10 | 2.10 | 2.52 |
| Pfam domain | 39.30 | 12.65 | 10.10 | 11.18 |
| Signal peptide
|
1.00
|
1.88
|
1.30
|
1.54
|
-
The context of events was measured from annotation of the nonevent sequence (ancestral with respect to the indel). The background measure is the percentage of residues meeting the defined criteria, in the rodent nonredundant protein data set (see Methods).
