Table 2.
Reproducibility
|
|
Replicates |
Individuals |
Genotypes |
Discordances |
Call rate |
Reproducibility |
|---|---|---|---|---|---|---|
| Human variation panel | 9 | 8 | 820,235 | 40 | 98.59% ± 0.42% | 99.995% ± 0.003% |
| Peripheral blood
|
9
|
1
|
102,484
|
12
|
98.55% ± 0.81%
|
99.988%
|
-
Sample DNAs were independently run nine times, and consensus sets of genotype calls were constructed from the nine replicates. Discordances from the consensus were tallied; no calls were omitted from the comparison. The standard deviation of the call rate represents the variance among the replicates run for each individual. The standard deviation of the reproducibility reflects the variance among the eight individuals.
