Table 1A.
The Most Abundantly Represented Transcripts in the S. Stercoralis cDNA Libraries
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Non-redundant GenBank |
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|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ESTs from library |
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|
Cluster |
ESTs per cluster |
L1 |
L3i |
Best identity descriptor |
Accession SW/TRa |
E-value |
C. elegans Gene Wormpep |
||||
| 1 | SS00012.cl | 1097 | 8 | 1089 | S. stercoralis IGG immunoreactive antigen | O44394 | 6e-91 | F54B11.2b | ||||
| 2 | SS00013.cl | 234 | 4 | 230 | Crithidia fasciculata MURF-2 protein | Q34096 | 5e-06 | — | ||||
| 3 | SS00010.cl | 159 | 1 | 158 | Podocoryne carnea POD-EPPT, pod-EPPT protein | Q25677 | 2e-31 | T05A10.1b | ||||
| 4 | SS00028.cl | 136 | 0 | 136 | Zea mays HRGP, hydroxyproline-rich glycoprotein | Q41814 | 3e-18 | Y22D7AR1b | ||||
| 5 | SS01581.cl | 131 | 0 | 131 | novel | — | — | — | ||||
| 6 | SS01580.cl | 129 | 6 | 123 | S. stercoralis L3NIEAG.01 | Q9UA16 | 3e-40 | C07A4.3b | ||||
| SS00064.cl | 56 | 0 | 56 | S. stercoralis L2NIEAG.01 | Q9UA16 | 3e-141 | C07A4.3b | |||||
| SS01574.cl | 48 | 2 | 46 | S. stercoralis L3NIEAG.01 | Q9UA16 | 1e-40 | C07A4.3b | |||||
| 7 | SS01578.cl | 109 | 101 | 8 | novel | — | — | — | ||||
| 8 | SS01394.cl | 96 | 19 | 77 | Anisakis simplex troponin-like protein | Q9U3U5 | 7e-99 | F54C1.7b | ||||
| 9 | SS01577.cl | 70 | 0 | 70 | C. elegans HCH-1, metalloprotease | Q21059 | 2e-53 | F40E10.1 | ||||
| SS01564.cl | 38 | 0 | 38 | C. elegans HCH-1, metalloprotease | Q21059 | 2e-52 | F40E10.1 | |||||
| 10 | SS01515.cl | 49 | 47 | 2 | C. elegans ADP/ATP carrier protein | O45865 | 8e-178 | T27E9.1 | ||||
| 11 | SS00004.cl | 49 | 48 | 1 | C. elegans 60S acidic ribosomal protein | Q93572 | 2e-146 | F25H2.10 | ||||
| 12 | SS01616.cl | 43 | 0 | 43 | novel | — | — | — | ||||
| 13 | SS01569.cl | 42 | 26 | 16 | Necator americanus calreticulin precursor | O76961 | 1e-185 | Y38A10A.5b | ||||
| 14 | SS00165.cl | 42 | 36 | 6 | Onchocerca volvulus disulfide isomerase precursor | Q25598 | 4e-209 | C07A12.4b | ||||
| 15 | SS01567.cl | 40 | 37 | 3 | C. elegans 40S ribosomal protein S8 | P48156 | 3e-88 | F42C5.8 | ||||
| 16 | SS01566.cl | 39 | 22 | 17 | Loa loa SXP-1, immunodominant hypodermal antigen | Q9GU97 | 1e-05 | — | ||||
| 17 | SS01565.cl | 39 | 2 | 37 | C. elegans trehalase precursor | Q22195 | 3e-94 | T05A12.2 | ||||
| 18 | SS01563.cl | 38 | 38 | 0 | C. elegans ACT-4, actin 4 | P10986 | 1e-241 | M03F4.2 | ||||
| 19 | SS01562.cl | 37 | 19 | 18 | C. elegans EF-1-ALPHA, elongation factor 1-alpha | P53013 | 4e-186 | F31E3.5 | ||||
| 20 | SS01355.cl | 35 | 19 | 16 | C. elegans FTT-2, 14-3-3 like protein | Q20665 | 9e-131 | F52D10.3A | ||||
| 21 | SS00503.cl | 35 | 33 | 2 | C. elegans COX1, cytochrome C oxidase polypeptide I | P24893 | 5e-108 | — | ||||
| 22 | SS00069.cl | 34 | 34 | 0 | C. elegans COL-34, cuticular collagen | Q20087 | 6e-154 | F36A4.10 | ||||
| 23 | SS01559.cl | 33 | 27 | 6 | C. elegans RPL-4, ribosomal protein L1 | O02056 | 4e-141 | B0041.4 | ||||
| 24 | SS00810.cl | 32 | 25 | 7 | C. elegans RPS-9, ribosomal protein S9 | Q20228 | 6e-97 | F40F8.10 | ||||
| 25
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SS01557.cl
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31
|
0
|
31
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C. elegans EGL-3, prohormone convertase 2
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Q10575
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5e-120
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C51E3.7A
|
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↵a SW/TR is SWISS-PROT and TrEMBL Proteinknowledgebase (http://us.expasy.org/sprot/)
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↵b C. elegans homolog present but with a lower probability match than the best GenBank descriptor
