Table 1.
Pathways Analyzed and Percentage Showing Significant Clustering in Unmerged and Merged Data Sets
|
Organism |
# Pathways analyzed |
# Genes |
% Significant unmerged data |
% Significant merged data |
% in random data |
|---|---|---|---|---|---|
| H. sapiens | 98 | 975 | 78% | 65% | 11% |
| C. elegans | 86 | 516 | 74% | 58% | 11% |
| D. melanogaster | 85 | 484 | 50% | 30% | 12% |
| A. thaliana | 79 | 318 | 60% | 43% | 11% |
| S. cerevisiae
|
89
|
682
|
35%
|
20%
|
10%
|
-
The percent significant refers to pathways in which the score is more than 3* (3rd quartile – median) + median. The same analysis was carried out on randomized pathways where genes were picked randomly from all genes, using the merged data
