EAnnot: A genome annotation tool using experimental evidence

Table 3.

Manual evaluation of 101 predicted transcripts from 15 genes




Number of correct predictions

Gene name
Number of EAnnot predictions
Standard variants
Intron retension variants
Number of incorrect predictions
QRSL1 5 4 0 1
RTN4IP1 7 5 2 0
BXDC1 5 5 0 0
CD164 7 6 1 0
FYN 12 8 4 0
SNX3 5 5 0 0
TUBE1 5 2 2 1
PKIB 7 5 2 0
RWDD1 6 5 1 0
NICAL 16 13 3 0
SSR1 8 6 0 2
CAGE1 5 5 0 0
TXNDC5 4 4 0 0
PECI 7 6 1 0
CDYL 4 4 0 0
Total 101 83 14 4

100.00%
82.18%
13.86%
3.96%

This Article

  1. Genome Res. 14: 2503-2509

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