Table 2.
RNA edits by repeat class and subclass
|
Repeat |
Bases sequenced |
Repeats sequenced |
Repeats edited |
Edits |
Edits/Mb |
|---|---|---|---|---|---|
| SINE/Alu (All) | 339,546 | 2151 | 302 | 1548 | 4559 |
| AluJ | 83,801 | 519 | 79 | 367 | 4379 |
| AluS | 196,178 | 1197 | 164 | 900 | 4588 |
| AluY | 45,628 | 283 | 43 | 231 | 5063 |
| FLAM | 9256 | 99 | 8 | 23 | 2485 |
| FRAM | 3114 | 34 | 8 | 27 | 8671 |
| Alu (MISC) | 1569 | 19 | 0 | 0 | 0 |
| SINE/MIR | 49,704 | 455 | 1 | 5 | 101 |
| LINE/L1 | 269,044 | 1258 | 18 | 116 | 431 |
| LINE/L2 | 71,420 | 456 | 0 | 0 | 0 |
| Simple | 21,191 | 497 | 6 | 11 | 519 |
| Low complexity | 18,502 | 471 | 0 | 0 | 0 |
| DNA | 54,155 | 398 | 2 | 6 | 111 |
| LTR | 103,375 | 505 | 4 | 7 | 68 |
| Other repeats | 10,743 | 69 | 0 | 0 | 0 |
| Other sequences
|
2,111,380
|
11,041
|
20
|
35
|
17
|
