Table 1.
Four high multiplicity edges in the ABA graph
|
|
|
|
|
|
Domain occurrenceb |
||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| No. |
Edge |
Length |
Conservationa |
Domain(s) |
Q7 |
P |
E |
Q8 |
|||
| 1 | 2 → 3 → 4 → 5 → 6 | 420 | 53% | GGDEF-EAL | 1 | 1 | 1 | ||||
| 2 | 0 → 1 | 58 | 51% | Response_reg | 1 | 1 | |||||
| 3 | 7 → 2 | 49c | 60% | GAF | 1 | 1 | |||||
| 4
|
2 → 3
|
157
|
43%
|
GGDEF
|
|
2
|
|
|
|||
-
↵a Average pairwise percent of conserved amino acids
-
↵b Number of occurrences of domain or domain combinations in the proteins
-
↵c The alignment corresponding to this domain extends into block 2 in the graph (data not shown), and thus the alignment is longer than the length of the edge 7 → 2 in Figure 8B
