A novel method for multiple alignment of sequences with repeated and shuffled elements

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Figure 8.
Figure 8.

Four proteins with shuffled domains and their ABA graph. (A) The domain structures are derived from the SwissPfam database (Bateman et al. 2004). We show only well-annotated PfamA domains. Domains that appear in only one of the four sequences are not shown. (B) Cycles in the ABA graph reveal the extensive domain shuffling in these sequences.

This Article

  1. Genome Res. 14: 2336-2346

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