Analysis of Small Human Proteins Reveals the Translation of Upstream Open Reading Frames of mRNAs

Table 1.

Novel Short CDSs Identified by Searching Against Human cDNAs


GenBank Accession

Length (bp)

Novel CDS positiona

Novel CDS lengtha (amino acids)

Novel CDS initiator ATGa

Identified peptideb

Longest ORF positiona

Longest ORF lengtha (amino acids)
RefSeq cDNAs
NM_005770 1408 941...1120 59 6th QRDSEIMQQKRDDGLSAAAR 1023...1319 98
NM_015532 4107 12...272 86 1st QPQPAQNVLAAPRGLGAAEFGGAAGNVEAPGETFAQR 127...1233 368
NM_016215 1545 150...401 83 1st ATPGLQQHQQPPGPGR (N-terminus acetylated) 316...1137 273
FLJ cDNAs
AK057257
1904
23...280
85
1st
LLPLGASPAGVVGGGLAPPR
654...1013
119
  • a Each data is based on the sequence information of the corresponding cDNA.

  • b Peptides identified from MS samples (see Methods).

This Article

  1. Genome Res. 14: 2048-2052

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