Table 1.
ORFeome and Interaction Studies of Viral Proteomes
|
Virus |
ORFs |
Interactions |
Interactions/ORF |
Reference |
|---|---|---|---|---|
| Hepatitis C virus (HCV) | ∼10a | 5 | 0.50 | Flajolet et al. (2000) |
| Vaccinia virus | 266 | 37 | 0.14 | McCraith et al. (2000) |
| T7 bacteriophage | 55 | 25 | 0.45 | Bartel et al. (1996) |
| Potato virus A (PVA) | 10a | 12 | 1.20 | Guo et al. (2001) |
| Pea seed-borne mosaic (PSbMV) | 10a | 8 | 0.80 | Guo et al. (2001) |
| Wheat streak mosaic virus (WSMV) | 10a | 12b | 1.20 | Choi et al. (2000) |
| Kaposi-sarcoma-associated virus (KSHV)
|
88
|
125
|
1.42
|
P. Uetz, Y.A. Dong, C. Zeretzke, M. Roupelieva, D. Rose, C. Atzler, and J. Haas in prep.
|
-
↵a Number of mature proteins derived from a single precursor. Among the 10 proteins of PVA, PSbMV, and WSMV there are two small proteins (6K1 and 6K2, 6 kD each) whose interactions were not tested in any of the studies presented here.
-
↵b Approximate number because interactions of overlapping protein fragments were not always assigned to defined mature proteins.
