Decoding Human Regulatory Circuits

Table 3.

Sequence Pairs Having Both a Bayes Ratio Greater Than 194 and a Predicted Module


Gene

Human RefSeq ID

Mouse RefSeqID

Bayes ratio
EGR1 (Aicher et al. 1999; Tsai et al. 2000) NM_001964 NM_007913 2.3854e+09
CSNK1E NM_001894 NM_013767 4.5797e+04
ACTG2 (Carson et al. 2000) NM_001615 NM_009610 3.9155e+04
RXRG (Downes et al. 1994; Georgiades and Brickell 1997; Rebhan et al. 1997) NM_006917 NM_009107 2.9500e+04
EEF1A2 (Bischoff et al. 2000; Knudsen et al. 1993; Rebhan et al. 1997) NM_001958 NM_007906 4.5916e+03
STK23 (Brenner 1998) NM_014370 NM_019684 2.4573e+03
IL 17B (Fohr et al. 1993; Hazama et al. 2002) NM_014443 NM_019508 1.4638e+03
NGFB NM_002506 NM_013609 9.1709e+02
KRT15 NM_002275 NM_008469 7.0175e+02
PVALB NM_002854 NM_013645 5.4857e+02
VAMP3 NM_004781 NM_009498 3.0971e+02
RING1 NM_002931 NM_009066 2.9679e+02
CYR61 NM_001554 NM_010516 2.8015e+02
PPAP2B NM_003713 NM_080555 2.5995e+02
TCAP (Rebhan et al. 1997; Valle et al. 1997) NM_003673 NM_011540 2.2401e+02
LZTR1 NM_006767 NM_025808 2.0356e+02
TRIM8 (Vincent et al. 2000)
NM_030912
NM_053100
1.9458e+02
  • Referenced genes have literature evidence of being muscle-specific or of having emphasized expression in muscle tissue.

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  1. Genome Res. 14: 1967-1974

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