Table 1.
BAC Clones Used in This Study
|
Loci |
Names |
BAC ID |
Map position |
Length (bp) |
Accession no. |
|---|---|---|---|---|---|
| c1/pl1 | c1 | Z438D03 | ch9S | 184890 | AY530950 |
| c1 extension | Z214A02 | ch9S | 159000 | AY530951 | |
| pl1 | Z576C20 | ch6L | 155173 | AY530952 | |
| pl1 extension | Z264N17 | ch6L | 161000 | AY560577 | |
| Sorghum ortholog | SB35P03 | Unknown | 144120 | AF466199 | |
| Rice ortholog | OSJNBb0015B15 | ch6 | 123160 | AP005652 | |
| r1/b1 | r1 | Z138B04 | ch10L | 115734 | AF466202 |
| r1 extension | Z333J11 | ch10L | 207475 | AF466202 | |
| b1 | Z092E12 | ch2S | 147198 | AF466203 | |
| b1 extension | Z556K20 | ch2S | 90000 | AY542310 | |
| Sorghum ortholog | SB20O07 | Unknown | 157237 | AY542311 | |
| Rice ortholog | OSJNBa0065O17 | ch4 | 167446 | AL606682 | |
| Rice ortholog extension | OSJNBb0012E24 | ch4 | 127506 | AL606647 | |
| tb1/tb2 | tb1 | Z178A11 | ch1L | 130843 | AF464738 |
| tb1 extension | Z013105 | ch1L | 152337 | AY325816 | |
| tb2 | Z195D10 | ch5S | 141937 | AF466646 | |
| Sorghum ortholog | SB45l19 | Unknown | 77947 | AF466204 | |
| Rice ortholog | OSJNBa0004G17 | ch3 | 139071 | AC091775 | |
| tbp1/tbp2 | tbp1 | Z477F24 | ch1L | 212000 | AY542798 |
| tbp2 | Z474J15 | ch5S | 194000 | AY542797 | |
| Sorghum ortholog | SB32H17 | Unknown | 100707 | AF466201 | |
| Rice ortholog | OSJNBa0075A22 | ch3 | 153828 | AC133859 | |
| orp1/orp2 | orp1 | Z573F08 | ch4S | 181627 | AY555142 |
| Zmfie1 | Z078P04 | ch4S | 189000 | AY560576 | |
| orp2 | Z573L14 | ch10S | 144792 | AY555143 | |
| Zmfie2 | Z273B07/Z409L08 | ch10S | 138000 | AY560578 | |
| Sorghum ortholog | SB18C08 | Unknown | 159669 | AF466200 | |
| Sorghum extension | SB250O22 | Unknown | 84604 | AF466200 | |
| Rice ortholog | OJ1613_G04 | ch8 | 136186 | AP003896 | |
| Rice ortholog extension | P0680F05 | ch8 | 17000 | AP005620 | |
| Total length
|
|
|
|
4293487
|
|
-
Sorghum and maize BACs were sequenced. Rice BACs were downloaded from the GenBank database.
