Table 5.
miRNAs Found in Exons of Nonprotein-Coding Transcription Units
|
microRNAa |
Chromb |
Human host TU IDc |
Mouse host TU IDc |
miRNA locationd |
Host transcript description |
|---|---|---|---|---|---|
| let-7b, let-7c-2 | 22 (15) | OTTHUMG00000030111 | Exon 1 | Vega mlncRNA | |
| let-7i | 12 (10) | D630033A02Rik | Exon 1 | Riken mlncRNA | |
| miR-22 | 17 (11) | ENSESTG00000028158 | 2210403K04Rik | Exon2 | Riken mlncRNA |
| miR-29b-2 | 1 (1) | 1_205058566 AceView | C030002C11Rik | Exon 1 | Riken mlncRNA |
| miR-34b, -34c | 11 (9) | ENSESTG00000013662 | Exon 2 | Novel mlncRNA | |
| miR-101-1 (miR-101) | 1 (4) | ENSMUSESTG00000022081 | Exon 2 | Novel mlncRNA | |
| miR-122a | 18 (18) | 18_54266208 AceView | Exon 2 | Novel mlncRNA | |
| miR-133b | 6 (1) | 6_52060506 AceView | Exon 1 | Novel mlncRNA | |
| miR-137 | 1 (1) | 1_97978084 AceView | ENSMUSESTG00000012545 | Exon 2 (3) | Novel mlncRNA |
| miR-143, -145 | 5 (18) | 5_148836826 AceView | Exon 1 | Novel mlncRNA | |
| miR-146 | 5 (11) | ENSESTG00000012459 | 5830402E17Rik | Exon 2 (1) | Riken mlncRNA |
| miR-155 | 21 (16) | 114614 NCBI | Bic NCBI | Exon 3 (2) | BIC mlncRNA |
| miR-192 | 11 (19) | 11_64434198 AceView | Exon 1 | Novel mlncRNA | |
| miR-195 | 17 (11) | LOC284112 AceView | Exon 1 | Novel mlncRNA | |
| miR-196b | 7 (6) | 7_26962152 AceView | Exon 1 | Novel mlncRNA | |
| miR-199a-2, -199a*-2 | 1 (1) | 1_169353084 AceView | Exon 1 | Novel mlncRNA | |
| miR-202 | —(7) | G630041I22Rik | Exon 2 | Riken mlncRNA | |
| miR-206 | 6 (1) | 4831414J02Rik | Exon 1 | 7H4 mlncRNA | |
| miR-214 | 1 (1) | 1_169353084 AceView | D230012O04Rik | Exon 2 (1) | Riken mlncRNA |
| miR-215 | 1 (1) | 2010103J01Rik | Exon 2 | Riken mlncRNA | |
| miR-221 | X (X) | X_44651888 AceView | Exon 1 | Novel mlncRNA | |
| miR-223 | X (X) | X_64102086 AceView | 9830169G21Rik | Exon 3 (2) | Riken mlncRNA |
| miR-296 | 20 (2) | 20_58078195 AceView | D330038P10Rik | Exon 1 | Riken mlncRNA |
| miR-324-5p, -324-3p | 17 (11) | 17_7329130 AceView | Exon 3 | Novel mlncRNA | |
| miR-331
|
12 (10)
|
|
A630071D13Rik
|
Exon 1
|
Riken mlncRNA
|
-
↵a miRNA names listed in parentheses refer to the mouse name if different from the human.
-
↵b The human chromosome is listed first followed by the mouse chromosome in parentheses.
-
↵c Transcript IDs are from ENSEMBL, Vega, FANTOM2, NCBI, or Acembly AceView.
-
↵d Exon positions for miRNAs in transcript are listed. If the human/mouse positions are different, the mouse location is presented in parentheses.
