Human, Mouse, and Rat Synteny
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Syntenyb |
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|---|---|---|---|---|---|
| Species |
BACs placed |
Genome covered by BACsa |
Totalc |
Per blockd |
|
| Mouse vs. Rat | 108,680 | 2.32 Gb mouse, 2.44 Gb rat, 90% | 146 blocks, 2.47 Gb mouse and 2.64 Gb rat. | 743 BACs, 16.9 Mb mouse and 18.5 Mb rat. | |
| Human vs. Mouse | 29,463 | 1.65 Gb mouse, 1.83 Gb human, 64% | 299 blocks, 2.31 Gb mouse and 2.55 Gb human. | 98 BACs, 7.9 Mb mouse and 8.5 Mb human. | |
| Human vs. Rat | 26,729 | 1.62 Gb rat, 1.71 Gb human, 60% | 295 blocks, 2.42 Gb rat and 2.48 Gb human. | 90 BACs, 8.2 Mb rat and 8.4 Mb human. | |
| Human, mouse and rat
|
21,363
|
1.41 Gb mouse, 1.47 Gb rat, 1.56 Gb human, 55%
|
328 blocks, 2.2 Gb mouse, 2.3 Gb rat and 2.4 Gb human.
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64 BACs, 6.8 Mb mouse, 7.2 Mb rat, and 7.3 Mb human.
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↵a The total number of bases (in Gb) and the percentage of the genome covered by the BACs for each genome involved.
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↵b All clones within a block are in the same order and orientation on each genome involved. Blocks with the same orientation were merged without considering gaps, after discarding blocks with size <100 kb or total clone # below 6 for mouse vs. rat, 3 for human vs. mouse or rat, 2 for the three species.
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↵c Total number of syntenic blocks identified, total amount of genome covered by the blocks on each genome.
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↵d Average number of BACs per block, average block size on each genome involved.
