Ordered Partitioning Reveals Extended Splice-Site Consensus Information

Table 2.

Percent A Content Near Donor Splice Sites

Graphic
Match to donor % A ± S.D. (n)
7 of 7 25.5 ± 4.0 (517) 26.0 ± 8.3 (517) 27.5 ± 10.0 (478) 29.5 ± 3.3 (478)
6 of 7 25.8 ± 3.7 (1068) 28.1 ± 8.4 (1068)c 30.3 ± 10.3 (686)c 29.9 ± 3.5 (686)c
5 of 7
26.0 ± 3.6 (432)
29.3 ± 9.2 (432)d
32.1 ± 11.0 (266)d
30.5 ± 3.6 (266)
  • a Exons 512−4095, introns unconstrained

  • b Introns 512−8191, exons unconstrained

  • c 6-of-7 > 7-of-7, p > 0.99 by one-tailed t-test using observed standard deviations (S.D.) in percent A content

  • d 5-of-7 > 6-of-7, p > 0.99 by one-tailed t-test using observed standard deviations (S.D.) in percent A content

This Article

  1. Genome Res. 14: 67-78

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