CONREAL: Conserved Regulatory Elements Anchored Alignment Algorithm for Identification of Transcription Factor Binding Sites by Phylogenetic Footprinting

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Figure 2
Figure 2

Intersection of conserved reference sites found by AVID, LAGAN, and CONREAL approaches in (A) human–mouse–rat and (B) mammals–fish gene pairs. The analysis parameters are 75% PWM threshold, 50% homology threshold, and 5-bp flank length.

This Article

  1. Genome Res. 14: 170-178

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