Hierarchical Scaffolding With Bambus

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Figure 5
Figure 5

Detailed information produced by Bambus. Shown are two contigs connected by two valid links (v:2 in the header line), with 1 additional link whose length is outside the estimated range and therefore invalid (l:1). The contigs face away from each other, indicated by the arrows (“→”) in the header. Each pair of linked reads is shown on a separate line, with coordinates indicating the position of the read within its contig. For example, GBRDE74TR is mapped to positions 890-1416 of contig_32, and GBRDE74TF is mapped to positions 413-1207 of contig_38.

This Article

  1. Genome Res. 14: 149-159

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