Table 4.
Number of Mitochondrial-Like Clones Identified in the Halocynthia roretzi (Hr) and Ciona intestinalis (Ci) Published cDNA Libraries
|
|
|
|
Ci |
||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Gene-Hr
|
Hr egg
|
Gene-Ci
|
Egg
|
CLS
|
TB
|
LV-1
|
LV-2
|
AD-1
|
AD-2
|
TS
|
Hem
|
Total
|
|||||||||
| CO2 (sea urchin) | 1 | 1 | |||||||||||||||||||
| ND2 (sea urchin) | 1 | 1 | |||||||||||||||||||
| 16S rRNA (H. roretzi) | 3 | 3 | |||||||||||||||||||
| 16S rRNA | 249 | 16S rRNA | 1 | 1 | 2 | ||||||||||||||||
| CO1/ND3 | 1 | CO1 | 37 | 25 | 54 | 6 | 19 | 44 | 185 | ||||||||||||
| CO2/Cytb | 10 | CO2/Cytb/ND4L/CO3 | 57 | 58 | 99 | 2 | 4 | 11 | 81 | 312 | |||||||||||
| ND1/ATP6 | 3 | ND1 | 3 | 2 | 2 | 1 | 8 | 1 | 17 | ||||||||||||
| ND2 | 3 | ATP6/ND2 | 1 | 6 | 3 | 11 | 1 | 22 | |||||||||||||
| ND3 | 7 | 7 | 2 | 16 | |||||||||||||||||
| ND4 | 2 | ND4 | 3 | 1 | 11 | 1 | 6 | 1 | 23 | ||||||||||||
| ND5 | 3 | ND5 | 3 | 3 | 5 | 4 | 1 | 16 | |||||||||||||
| ND6 | 1 | ||||||||||||||||||||
| Singletons | Singletons | 1 | 3 | 5 | 4 | 4 | 1 | 1 | |||||||||||||
| mt-like clones | 272 | mt-like clones | 104 | 96 | 184 | 3 | 11 | 33 | 0 | 156 | 4 | 591 | |||||||||
| Sequenced clones | 2289 | Sequenced clones | 17,960 | 16,392 | 12,403 | 14,193 | 3637 | 25,286 | 66 | 5718 | 2057 | 97,748 | |||||||||
| % mt-like clones
|
11.88
|
% mt-like clones
|
0.58
|
0.59
|
1.48
|
0.02
|
0.30
|
0.13
|
0.00
|
2.73
|
0.19
|
0.60
|
|||||||||
-
(Egg) Fertilized eggs (Nishikata et al. 2001); (CLS) Cleavage stage embryo (Fujiwara et al. 2002); (TB) tailbud embryo (Satou et al. 2001); (LV-1) larval stage (Kusakabe et al. 2002). (LV-2) larval stage; (M. Branno et al. unpublished); (AD-1) adult (Ogasawara et al. 2002); (AD-2) adult (Simmen et al. 1998); (TS) testis (Inaba et al. 2002); (Hem) hemocytes (K. Shida unpubl.)
