Table 3.
EGO Groups Combined by OrthoMCL Group 380487 (GAPDH)a
|
|
Yeast |
Fly |
Worm |
||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Gene: Protein: |
TDH1 YJL052W |
TDH2 YJR009C |
TDH3 YGR192C |
Gapdh1 Fbgn 0001092 |
Gapdh2 Fbgn 0001091 |
Gpd-1 CE02343 |
gpd-2 CE07371 |
gpd-3 CE07370 |
Gpd-4 CE01568 |
||||||
| EGO group | |||||||||||||||
| 248594: | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ||||||||
| 248635: | ✓ | ✓ | ✓ | ✓ | ✓ | ||||||||||
| 248718: | ✓ | ✓ | ✓ | ✓ | ✓ | ||||||||||
| 248791: | ✓ | ✓ | ✓ | ✓ | |||||||||||
| 249074: | ✓ | ✓ | ✓ | ||||||||||||
| 249666: | ✓ | ✓ | ✓ | ||||||||||||
| 249879: | ✓ | ✓ | ✓ | ||||||||||||
| 250009: | ✓ | ✓ | ✓ | ||||||||||||
| 253481: | ✓ | ✓ | ✓ | ||||||||||||
| 250748: | ✓ | ✓ | |||||||||||||
| 251654: | ✓ | ✓ | |||||||||||||
| 256270: | ✓ | ✓ | |||||||||||||
| 252346: | ✓ | ✓ | |||||||||||||
| 255159: | ✓ | ✓ | |||||||||||||
| Gene Index (TC#):
|
11801
|
10521
|
8903
|
139089
|
128588
|
70553
|
70631
|
70524
|
none
|
||||||
-
↵a OrthoMCL group 380487 includes nine glyceraldehyde 3-phosphate dehydrogenase (GAPDH) genes: yeast TDH1, -2, and -3; fly Gapdh1 and -2; and worm gpd-1, -2, -3, and -4. Eight of these genes are included in 14 distinct EGO groups. Correlation of proteins with Gene Index TC numbers was carried out by comparing TCs with the organism proteomes using BLASTP to identify best matches with P values <1e-5.
