Table 4.
Depth of the Mapped PANTHER/X Terms in GO
|
|
GO depth with equivalent PANTHER/X-GO mapping |
GO depth with a more general GO category mapped to PANTHER/X |
||||
|---|---|---|---|---|---|---|
| PANTHER/X level
|
Molecular function
|
Biological process
|
Molecular function
|
Biological process
|
||
| Level 1 | 1.90 ± 0.78 | 2.78 ± 0.85 | 1.25 ± 0.50 | 2.5 ± 1.00 | ||
| Level 2 | 3.61 ± 1.21 | 4.22 ± 1.30 | 2.18 ± 1.12 | 3.29 ± 1.04 | ||
| Level 3 | 4.45 ± 1.11 | 5.04 ± 1.09 | 3.36 ± 1.12 | 3.52 ± 2.27 | ||
| Overall
|
3.68 ± 1.36
|
4.27 ± 1.37
|
2.32 ± 1.20
|
3.32 ± 1.58
|
||
-
For each level of PANTHER/X, we calculated the average (standard deviation) depth, in the Gene Ontology, of the GO term to which a PANTHER/X term was mapped. We calculated statistics separately for PANTHER/X terms that could be mapped to an equivalent GO term, versus PANTHER/X terms that could only be mapped to a more general GO term.
