Assessment of Genome-Wide Protein Function Classification for Drosophila melanogaster

Table 3.

Mapping the PANTHER/X Ontology to GO




Map to equivalent GO categories

Map to more general GO categories

No match

Total
Molecular function
    Overall 160 (65.5%) 64 (26.2%) 20 (8.2%) 244
    Level 1 categories 20 (66.7%) 4 (13.3%) 6 (20.0%) 30
    Level 2 categories 91 (60.3%) 49 (32.4%) 11 (7.3%) 151
    Level 3 categories 49 (77.7%) 11 (17.5%) 3 (4.8%) 63
Biological process
    Overall 167 (67.0%) 66 (26.5%) 16 (6.4%) 249
    Level 1 categories 23 (63.9%) 4 (11.1%) 9 (25.0%) 36
    Level 2 categories 95 (67.3%) 39 (27.7%) 7 (5.0%) 141
    Level 3 categories
49 (68%)
23 (32%)
0.00%
72
  • For both molecular function and biological process, approximately two-thirds of the PANTHER/X terms can be mapped to an exactly equivalent term in GO, and approximately an additional one-quarter of PANTHER/X terms can be mapped to a GO term that is more general than the PANTHER/X term.

This Article

  1. Genome Res. 13: 2118-2128

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