Application of DNA Microarrays to Study the Evolutionary Genomics of Yersinia pestis and Yersinia pseudotuberculosis

Table 2.

Potential Virulence Determinants Which Are Absent or Highly Divergent in Some of the 10 Y. pseudotuberculosis Strains Tested






354 (O:1b)

Pa3606 (O:1b)

YPIII pIB1 (O:3)

83 (O:3)

Pa3423 (O:3)

197 (O:5b)

141 (O:7)

wla872 (O:7)

SP93422 (O:15)

SP940616 (O:15)
YPO0599-602 Putative adhesin. - - + + - - - - + +
YPO0947 Putative virulence determinant + 0.65 + + 0.75 0.5 + + 0.7 +
YPO1002 Enterotoxin-like protein 0.6 0.6 + + + + 0.65 + 0.5 +
YPO1003 Putative exported protein + 0.7 + + + + 0.6 + 0.6 0.65
YPO1004 Putative autotransporter yapH. + - + + + + - - - +
YPO1898-1917 Yersiniabactin locus. - - - - - - - - + -
YPO2044 Putative hemolysin activator protein. + 0.3 + + + 0.3 0.3 0.25 0.3 0.3
YPO2045 Putative hemolysin. 0.4 0.4 + + 0.5 0.4 0.2 0.2 0.3 0.45
YPO2150 LysR-family transcriptional regulator. + + + + + - - + - -
YPO2490 Putative hemolysin + - 0.5 - - 0.2 0.3 + - -
YPO2886 Putative autotransporter yapA. + + - - + + + + + +
YPO2887 Putative autotransporter yapB. + + 0.55 0.7 0.7 0.5 0.7 + 0.6 0.7
YPO3673 Putative insecticidal toxin TccC. + + 0.35 0.35 + + + + 0.7 0.75
YPO3674 Putative insecticidal toxin TccC. + + 0.4 0.5 + + + + + +
YPO3678 Putative insecticidal toxin TcaC. 0.4 0.3 0.5 0.6 0.5 0.5 0.4 0.3 0.4 0.45
YPO3679 Putative insecticidal toxin TcaB. 0.4 0.35 + + 0.65 0.55 0.6 0.4 0.35 0.4
YPO3681 Putative insecticidal toxin TcaA. + + + + + + + + + +
YPO3682 LysR-family transcriptional regulator. + 0.3 + + 0.45 0.4 0.5 0.7 0.5 0.7
YPO3720 Putative hemolysin activator protein + + 0.4 0.4 + + 0.7 + 0.7 0.75
YPO3883-3885
Colicin and immunity protein
-
-
+
+
-
-
+
-
-
-
  • Selected genes that may be involved in virulence or host adaptation. Y. pseudotuberculosis strain names are followed by their serotype in parentheses. The presence of a gene is indicated by a plus sign (+), absence by a minus sign (-), and divergence by the signal to control ratio represented numerically.

This Article

  1. Genome Res. 13: 2018-2029

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