Detection and Assignment of Mutations and Minihaplotypes in Human DNA Using Peptide Mass Signature Genotyping (PMSG): Application to the Human RDS/Peripherin Gene

Table 4.

Mass Differences for All Amino Acid Substitutions Resulting From Single Nucleotide Transitions or Transversions


Ile-Leu

0.00

Leu-Met

18.03

Pro-His

40.02
Gln-Lys 0.04 Ile-Met 18.03 Gly-Val 42.08
Lys-Glu 0.94 His-Arg 19.05 Ala-Asp 43.02
Ile-Asn 0.95 Asp-His 22.05 Ile-Arg 43.03
Gln-Glu 0.98 Asn-His 23.04 Leu-Arg 43.03
Asn-Asp 0.98 Leu-His 23.98 Cys-Phe 44.04
Lys-Met 3.02 Met-Arg 25.00 Gly-Cys 46.09
Pro-Thr 3.99 Pro-Ala 26.04 Val-Phe 48.05
Gln-His 9.01 His-Tyr 26.04 Asp-Tyr 48.09
Ser-Pro 10.04 Ser-Ile 26.08 Asn-Tyr 49.08
Ile-Thr 12.05 Ser-Leu 26.08 Cys-Arg 53.05
Thr-Asn 12.99 Ser-Asn 27.02 Thr-Arg 55.08
Asp-Glu 14.03 Thr-Lys 27.06 Ala-Glu 58.04
Gly-Ala 14.03 Lys-Arg 28.02 Gly-Asp 58.04
Ser-Thr 14.03 Ala-Val 28.05 Pro-Arg 59.07
Ile-Val 14.03 Gln-Arg 28.06 Cys-Tyr 60.04
Leu-Val 14.03 Val-Glu 29.99 Ser-Phe 60.10
Asn-Lys 14.07 Trp-Arg 30.02 Ser-Arg 69.11
Leu-Gln 14.97 Ala-Thr 30.03 Gly-Glu 72.07
Ile-Lys 15.01 Gly-Ser 30.03 Leu-Trp 73.05
Val-Asp 15.96 Thr-Met 30.08 Ser-Tyr 76.10
Phe-Tyr 16.00 Pro-Gln 31.01 Cys-Trp 83.07
Ala-Ser 16.00 Val-Met 32.06 Ser-Trp 99.13
Pro-Leu 16.04 Ile-Phe 34.02 Gly-Arg 99.14
Ser-Cys
16.06
Leu-Phe
34.02
Gly-Trp
129.16
  • Residue masses from http://www.bmrb.wisc.edu/ref_info/aadata.dat

This Article

  1. Genome Res. 13: 1944-1951

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