Table 5.
Results on Chromosome 22 Based on the Annotation and Sequence Used by Collins et al. (2003)
|
|
TP |
FP |
Total # of TSSs |
Total # of predictions |
Se |
ppv |
ASM |
CC |
|---|---|---|---|---|---|---|---|---|
| Dragon GSF | 269 | 69 | 393 | 898 | 0.6845 | 0.7959 | 1.1818 | 0.7381 |
| FirstEF | 331 | 501 | 393 | 2595 | 0.8422 | 0.3978 | 3.6364 | 0.5789 |
| FirstEF (CpG+) | 310 | 185 | 393 | 1428 | 0.7888 | 0.6263 | 2.1818 | 0.7028 |
| Eponine
|
199
|
79
|
393
|
2066
|
0.5064
|
0.7158
|
3.0000
|
0.6021
|
-
The maximum allowed distance between the predicted TSS and real TSS is 2000 nt
