Table 5.
The Gene Recommender Is More Precise Than the Gene Expression Topomap
|
|
|
Size |
Precisione |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Query |
Na |
Gen. Rec.b |
Topomapc |
Randd |
Gen. Recall |
Topomap |
Random |
||||
| Retinoblastoma | 5 | 6 | 138 | 160 | 50% | 2% | 2% | ||||
| Recombination/Repairf | 6 | 57 | 1271 | 85 | 5% | 0% | 4% | ||||
| Synap complex | 6 | 4 | 246 | 85 | 75% | 1% | 4% | ||||
| MSP
|
43
|
32
|
225
|
4017
|
69%
|
10%
|
1%
|
||||
-
MSP, major sperm protein
-
↵a Number of genes in the query
-
↵b Number of genes found by the gene recommender at 50% recall
-
↵c Number of genes found by the gene expression topomap at 50% recall
-
↵d Number of genes found by the gene recommender from a set of random genes at 50% recall
-
↵e Percent of genes in the list at 50% recall that are from the query list
-
↵f This group is known to be comprised of two distinct subgroups, and hence resulted in a hit list with lower precision
