A Gene Recommender Algorithm to Identify Coexpressed Genes in C. elegans

Table 3.

Rb Query Has Higher Experiments Z Scores Than Random Queries


Z*a

Rbb

r5ac

r5b

r5c

r5d

r5e
0 3 19 82 116 197 48
1 3 8 31 116 163 88
2 4 3 63 359 69 328
3 8 3 81 23 332
4 8 13 103 29 500
5 13 61 191 149 421
6 11 41 234 210 537
7 8 44 344 228 537
8 4 106 196 399
9 4 140 164
10 3 254 164
11 3
12 3
13 4
14
4





  • a Z* is a threshold used to select experiments

  • b The number of genes not in the query that score higher than the median gene in the query, using an experiment threshold of Z*

  • c Results for five randomly-generated queries of five genes each. The blank entries appear for cases where fewer than five experiments scored higher than Z*. No gene scoring was done in such cases

This Article

  1. Genome Res. 13: 1828-1837

Preprint Server