Assessing the Drosophila melanogaster and Anopheles gambiae Genome Annotations Using Genome-Wide Sequence Comparisons

Table 2.

Comparisons Between Ecores on the Assembly of Anopheles and the Successive Ensembl Annotations


Set

Ecores

Genes

Genes detected

Ecores overlapping genes

Exons

Exons detected

Ecores overlapping exons

Ecores overlapping genes not overlapping exons
EnsEMBL Release 6.1a (number) 54,069 15,088 11,929 42,693 53,693 32,553 40,278 2,415
EnsEMBL Release 6.1a (%) n.d. n.d. 79.1 79.0 n.d. 60.6 74.5 4.5
EnsEMBL Release 10.2.1 (number) 53,132 14,658 10,759 39,749 56,573 32,610 39,247 502
EnsEMBL Release 10.2.1 (%)
n.d.
n.d.
73.4
74.8
n.d.
57.6
73.9
0.9
  • Genes and exons stand for annotated genes and exons in the corresponding versions

This Article

  1. Genome Res. 13: 1595-1599

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