Mechanisms of Thermal Adaptation Revealed From the Genomes of the Antarctic Archaea Methanogenium frigidum and Methanococcoides burtonii

Table 2.

Summary of Comparative Homology Modeling for Protein Sequences from Nine Methanogens

Organism
Putative ORFs
Top BLAST hits to PDB
Prospect templates
Prospect model files
Models generated
M. frigidum 1096 30 29 28 25
M. burtonii 2676 146 141 139 116
M. acetivorans 4540 226 223 220 182
M. barkeri 3145 180 175 173 142
M. maripaludis 1729 168 163 160 130
M. mazei 3371 210 206 203 168
M. thermautotrophicus 1873 173 169 164 124
M. jannaschii 1729 165 159 157 123
M. kandleri
1687
129
124
121
101

This Article

  1. Published in Advance June 12, 2003, doi: 10.1101/gr.1180903 Genome Res. 13: 1580-1588

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