Table 1B.
Summary of Text and Sequence-Based Functional Associations
|
Category |
Clones |
(%) |
Query |
(%) |
Term |
Source DB coverage |
|---|---|---|---|---|---|---|
| TEXT | ||||||
| Disease MeSH | 13,789 | 66.9 | 6,304 | 47.6 | 3,672 | 93.3 |
| GO | 19,720 | 95.7 | 8,973 | 67.7 | 4,765 | 41.4 |
| OMIM | 10,931 | 53.0 | 5,248 | 39.6 | 4,532 | 31.7 |
| Morbid map | 2,585 | 12.5 | 1,218 | 9.2 | 961 | 45.4 |
| BIND | 1,509 | 7.3 | 636 | 4.8 | 1,346 | 12.0 |
| DIP | 639 | 3.1 | 304 | 2.3 | 554 | 4.9 |
| SEQUENCE | ||||||
| GO | 16,518 | 80.1 | n/a | n/a | 2,844 | 24.7 |
| OMIM | 2,615 | 12.7 | n/a | n/a | 757 | 5.3 |
| Morbid map | 2,489 | 12.1 | n/a | n/a | 738 | 34.9 |
| BIND | 161 | 0.8 | 161 | 0.8 | 132 | 1.2 |
|
DIP
|
382
|
1.9
|
382
|
1.9
|
413
|
3.7
|
-
Comparisons among text and sequence-derived categories are based on 20,611 clones
All numbers are nonredundant
