Table 2.
Linking Statistics for the Explicitly Linked Resources in GeneLynx Mouse 1.0 RC1
|
Resource |
Number of items linked to GeneLynx |
Number of linked GeneLynx records |
|---|---|---|
| RIKEN cDNAs | 60,746 | 33,409 |
| UniGene, CGAP | 16,414 | 16,052 |
| cDNAs (GB/EMBL/DDBJ) | 44,102 | 13,686 |
| KEGG (genes) | 7,624 | 7,657 |
| KEGG (pathways) | 77 | 791 |
| Genomic sequences | 8,842 | 2,984 |
| LocusLink | 12,045 | 10,863 |
| Ensembl (genes) | 12,865 | 12,930 |
| Ensembl (transcripts) | 15,211 | 12,930 |
| RefSeq (NM) | 18,963 | 10,376 |
| MGI (MGD) | 19,729 | 17,638 |
| SWISS-PROT | 4,881 | 4,972 |
| TrEMBL | 18,970 | 12,190 |
| PIR | 4,035 | 2,648 |
| GenPept collection | 38,600 | 13,968 |
| PDB | 308 | 140 |
| HSSP | 1,155 | 4,011 |
| InterPro | 2,241 | 10,452 |
| PRINTS | 650 | 3,744 |
| BLOCKS/PRODOM | 1,965 | 2,395 |
| PFAM | 1,746 | 8,395 |
| SBASE | 79,997 | 2,857 |
| PROSITE | 1,086 | 7,107 |
| ENZYME DB/WIT/Brenda | 432 | 857 |
| Homologs (UniGene) | 14,016 | 14,265 |
| Homologs (LocusLink) | 6,362 | 5,091 |
| Homologs (nucleotide seqs) | 73,600 | 24,193 |
| Homologs (protein seqs) | 14,991 | 11,469 |
|
ESTs
|
1,745,916
|
14,905
|
