Exploration of the Cell-Cycle Genes Found Within the RIKEN FANTOM2 Data Set

Table 2.

Cyclin Genes of Mouse


Symbola

Description

VPS IDb

Protein accessionc

Nucleotide accession

Lengthd

ENSEMBL genee

Chromosomef

Position
CcnA1 cyclin A1 PC1172.1 4933406P14RIK AK077114 421 ENSMUSG00000027793 3 55513691-55523271
CcnA2 cyclin A2 PC1173.1 B130012D23RIK AK044924 422 ENSMUSG00000027715 3 36445101-36452177
CcnB1 cyclin B1 PB1174.0 NP_031655 NM_007629 430 ENSMUSG00000041431 13 98163773-98171907
cyclin B1 pseudogene PC60003.0 2610510C05RIK 2610510C05RIK 431 ENSMUSG00000041431 14 3696256-3698151
CcnB2 cyclin B2 PC1175.1 2810438P13RIK AK076122 398 ENSMUSG00000032218 9 71022667-71036508
cyclin B2 pseudogene #N/A #N/A AK048139 8 71302891-71304001
CcnB3 cyclin B3 PC21546.0 CAC94916 AJ416459 238 ENSMUSG00000039664 X 3147531-3163688
CcnC cyclin C PC6896.3 2310034123RIK AK009615 304 ENSMUSG00000028252 4 21310260-21332992
CcnD1 cyclin D1 PC1176.1 5730552F24RIK AK017834 295 ENSMUSG00000031071 7 135381270-135389916
CcnD2 cyclin D2 PC1177.1 1810059D21RIK AK007904 156 ENSMUSG00000000184 6 128026669-128047570
CcnD3 cyclin D3 PA1178.0/PC29928.0 P30282/C920026J05RIK M86183/AK083384 292 ENSMUSG00000034165 17 46621806-46625848
CcnE1 cyclin E1 PC1180.1 9430027E08RIK 9430027E08RIK 491 ENSMUSG00000002068 7 28627925-28636455
CcnE2 cyclin E2 PC1181.2 2510008E20RIK AK010929 403 ENSMUSG00000028212 4 10675389-10688099
ConF cyclin F PC1182.7 D430050H14RIK AK085183 777 ENSMUSG00000035996 17 23414843-23442489
CcnG1 cyclin G1 PA1183.0 P51945 L49507 294 ENSMUSG00000020326 11 41079097-41085715
CcnG2 cyclin G2 PC1184.2 A630048E05RIK AK041941 163 ENSMUSG00000029385 5 92942535-92951144
CcnH cyclin H PA8616.0 Q61458 AF287135 323 ENSMUSG00000021548 13 82301682-82325153
CcnI cyclin I PC1185.2 A130017J05RIK AK079476 377 ENSMUSG00000029382 5 92857953-92877393
J-like* PC32637.0 D430039C20RIK AK052506 379 ENSMUSG00000025010 19 40544158-40553302
CcnK cyclin K PC1186.1 AAH27297 BC027297 206 ENSMUSG00000021258 12 102443711-102452394
CcnL cyclin L/ania-6a PC70541.1/PB7529.0 D130043G23RIK/NP_064321 AK051380/NM_019937 532 ENSMUSG00000027829 3 66478330-66490378
Pcee-pending cyclin ania-6B PC7227.1 1810019L15RIK AK007552 224 ENSMUSG00000029068 4 151263482-151275446
L-like* PC10625.0/PC60129.0 AAH27022/1810009O10RIK BC027022/AK007413 249 ENSMUSG00000037261 11 79391180-79391845
CcnT1 cyclin T1 PC1187.1 NP_033963 NM_009833 724 ENSMUSG00000011960 15 99455704-99480696
CcnT2 cyclin T2 PC13788.0 9930005L08RIK AK036772 173 ENSMUSG00000026349 1 128569488-128598789
Ung
UNG 2
PC33252.1
D930033C21RIK
AK086507
352
ENSMUSG00000042417
13
110585514-110587664
  • a Gene symbol from MGI

  • b Variable Protein Set ID

  • c Protein accession and corresponding Nucleotide accession number

  • d Length of peptide in amino acids

  • e ENSEMBL mouse gene assignment

  • f Genomic location

  • * L-like and J-like cyclins identified in this study. Pseudogenes were determined by BLASTN against genomic sequence

This Article

  1. Genome Res. 13: 1366-1375

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