The Mouse Secretome: Functional Classification of the Proteins Secreted Into the Extracellular Environment

Table 5.

Top 20 InterPro Domains and SCOP Superfamilies Associated Exclusively With the Mouse Secretome


InterPro Domains
Domain
No.
Description
IPR001111 18 Transforming growth factor beta (TGFb), N-terminal
IPR000867 16 Insulin-like growth factor-binding protein, IGFBP
IPR003129 15 Thrombospondin, N-terminal
IPR000827 14 Small chemokine, C-C subfamily
IPR001886 14 Laminin, N-terminal
IPR001134 11 Netrin, C-terminal
IPR002366 11 Alpha defensin
IPR000471 10 Interferon alpha, beta, and delta family
IPR000034 7 Laminin B
IPR000532 6 Glucagon/GIP/secretin/VIP family
IPR001855 6 Beta defensin
IPR003146 6 Carboxypeptidase activation peptide
IPR003990 6 Pancreatitis-associated protein
IPR000098 5 Interleukin-10
IPR001442 5 Type 4 procollagen, C-terminal repeat
IPR002890 5 Alpha-2-macroglobulin, N-terminal
IPR003014 5 N/apple PAN
IPR003367 5 Thrombospondin type 3 repeat
IPR003645 5 Follistatin-like, N-terminal
IPR000074
4
Apolipoprotein A1/A4/E
SCOP Superfamilies
Domain
No.
Description
57392 23 Defensin-like
53955 9 Lysozyme-like
56994 8 Insulin-like
47162 5 Apolipoprotein
48201 5 Uteroglobin-like
49410 5 Alpha-macroglobulin receptor domain
50242 5 TIMP-like
57414 5 Hairpin loop containing domain-like
51101 4 Mannose-binding lectins
57581 4 TB module/8-cys domain
47686 3 Anaphylotoxins (complement system)
47862 3 Saposin
51294 3 Hedgehog/intein (Hint) domain
55166 3 Hedgehog/DD-pepidase
55895 3 Ribonuclease Rh-like
57603 3 Fibronectin type I module
55545 2 beta-N-acetylhexosaminidase
57190 2 Colipase-like
57283 2 PMP inhibitors
57288
2
Midkine

This Article

  1. Genome Res. 13: 1350-1359

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