Table 3.
Predicted Signal Peptides and Transmembrane Domains in Eukaryotic Proteomes
|
|
|
S. cerevisciae |
A. thaliana |
D. melanogaster |
C. elegans |
Riken RPS |
|||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Feature |
Annotation |
Number |
% |
Number |
% |
Number |
% |
Number |
% |
Number |
% |
||||||
| Signal Peptide predictions | Consensus annotation | 481 | 8.0 | 3549 | 13.7 | 2417 | 17.5 | 3657 | 18.4 | 3461 | 20.1 | ||||||
| Non-consensus | 28 | 0.5 | 234 | 0.9 | 124 | 0.9 | 178 | 0.9 | 174 | 1.0 | |||||||
| Total assigned | 509 | 8.5 | 3783 | 14.6 | 2541 | 18.4 | 3835 | 19.3 | 3635 | 21.1 | |||||||
| Transmembrane predictions | Consensus annotation | 1164 | 19.5 | 4789 | 18.5 | 2479 | 18.0 | 5591 | 28.1 | 3617 | 21.0 | ||||||
| Non-consensus | 221 | 3.7 | 1181 | 4.6 | 497 | 3.6 | 680 | 3.4 | 676 | 3.9 | |||||||
| Total assigned | 1385 | 23.1 | 5970 | 23.0 | 2976 | 21.6 | 6271 | 31.5 | 4293 | 24.9 | |||||||
| Total number of proteins | 6230 | 26,131 | 13,967 | 19,918 | 18,768 | ||||||||||||
|
Total full-length ORFs
|
5984
|
25,901
|
13,791
|
19,886
|
17,209
|
||||||||||||
