Table 1.
Existing Ontologies That Are Relevant to Human Expression Data
|
|
Website |
Scope |
|---|---|---|
| CBIL | http://www.cbil.upenn.edu/anatomy.php3 | Adult anatomy |
| Cytomer | http://www.biobase.de/pages/products/cytomer.html | Human developmental anatomy |
| HUMAT | http://www.ana.ed.ac.uk/anatomy/database/humat/ | Human developmental anatomy |
| EPOdb | http://www.cbil.upenn.edu/EpoDB/release/version_2.2/controlled.vocab.html | Human anatomy, developmental stage, cell type |
| GeneX | http://www.ncgr.org/genex/ | Human gene expression |
| MeSH | http://www.nlm.nih.gov/mesh/meshhome.html | Clinical ontology |
| UMLS | http://www.nlm.nih.gov/research/umls/umlsmain.html | Clinical ontology |
| GALEN | http://www.opengalen.org/ | Clinical ontology |
| SNOMED | http://www.snomed.org/main.html | Clinical ontology |
|
ICD-9-CM
|
http://www.cdc.gov/nchs/about/otheract/icd9/abticd9.htm
|
Clinical ontology
|
