LineUp: Statistical Detection of Chromosomal Homology With Application to Plant Comparative Genomics

Table 5.

Chromosome Pairs With Colinear Runs Identified in Different Maps at 1% Significance

Reference chromosome
1 2 3 4 5 6 7 8 9 10
1 p bp bpu pu bpiu p p bp bpu p
2 bp p bp p pu p bpu bp bpiu
3 bpu p bp p p p bpu p pu
4 pu p p bp bpiu p bp p bp p
5 bpiu p p bpu p bp p
6 p p p p p p p
7 p bpu p bp b p p
8 bp p bpu bp p pu pu pu bp
9 pu bp p bp pu p
10 piu pu bp p bp p

  • The map names are abbreviated to the first letter: b, BNL96; p, Pio99; i, IBM2002; and u, UMC98.

This Article

  1. Published in Advance April 14, 2003, doi: 10.1101/gr.814403 Genome Res. 13: 999-1010

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