DNA Analysis by Fluorescence Quenching Detection

Table 2.

Allele Frequency Estimates of Pooled DNA Sample Compared with Observed Allele Frequencies

Single nucleotide polymorphism markers (R110/Tamra) Pool 1 32 African-American individuals Pool 2 32 Asian-American individuals Pool 3 32 European-American individuals
Known (allele) Measured (mean ± SD) Known (allele) Measured (mean ± SD) Known (allele) Measured (mean ± SD)
rs3157 G/A 0.81 (A) 0.81 ± 0.007 0.55 (A) 0.53 ± 0.013 0.61 (A) 0.60 ± 0.012
rs3157 C/T 0.81 ± 0.007 0.52 ± 0.010 0.59 ± 0.018
rs688 G/A 0.48 (A) 0.47 ± 0.007 0.034 (A) 0.025 ± 0.015 0.45 (A) 0.44 ± 0.005
rs696 G/A 0.61 (A) 0.62 ± 0.006 0.41 (A) 0.44 ± 0.014 0.31 (A) 0.32 ± 0.024
rs696 C/T 0.61 ± 0.009 0.43 ± 0.006 0.35 ± 0.009
rs245 A/T 0.59 (A) 0.58 ± 0.015 0.55 (A) 0.54 ± 0.014 0.41 (A) 0.39 ± 0.010
rs3354 G/A 0.28 (A) 0.24 ± 0.018 0.30 (A) 0.25 ± 0.010 0.22 (A) 0.19 ± 0.009
  • SD, standard deviation of the mean: Four replicates were done for each pooled sample.

This Article

  1. Genome Res. 13: 932-939

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