Discovering Novel cis-Regulatory Motifs Using Functional Networks

Table 1.

Summary of All of the Motifs

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  • “Occurrence” is the number of genes in the overlap network derived from the relevant functional network(s) (see network column). The column network shows where the motif was initially found having a significant overlap score. K, KEGG; C, Cellzome; M, MDS. The standard deviation columns, SD KEGG, SD cell, and SD MDS are the cluster standard deviations from the mean of random overlap scores applied to the functional network KEGG, Cellzome, and MDS, respectively. The Function column is a functional annotation based on the overlap genes annotation.

This Article

  1. Genome Res. 13: 883-895

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