Genomic Gene Clustering Analysis of Pathways in Eukaryotes

Table 2.

Average Distance of Random Pairs of Genes on a Chromosome

Species Average distance SD
H. sapiens 62.79 Mb 14.1 Mb
C. elegans 5.58 Mb 0.89 Mb
D. melanogaster 7.76 Mb 1.39 Mb
A. thaliana 8.81 Mb 1.92 Mb
S. cerevisiae 0.33 Mb 0.077 Mb
  • This information may be used to determine if genes deviate enough from the random distribution to be considered clustered. We used the average distance minus three standard deviations as significance cutoff for defining genes to be included in loose clusters in Figure 3.

This Article

  1. Genome Res. 13: 875-882

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