Quantitative Estimates of Sequence Divergence for Comparative Analyses of Mammalian Genomes

Table 1.

Estimates of Substitution Rates in Unconstrained Sites

From synonymous substitutions in coding sequences
 3,836 codons in CFTR Region 1.31 subs/site
 1,010 codons in BRCA1 exon 11 2.09 subs/site
From extrapolation of pairwise distances in entire CFTR region
 1,410,036 sites in Baboon/Human alignment 1.50 subs/site
   776,169 sites in Cow/Pig alignment 1.47 subs/site
 1,163,402 sites in Mouse/Rat alignment 1.29 subs/site
   823,493 sites in Cat/Dog alignment 1.32 subs/site
From multiple sequence alignment of CFTR region
   311,741 non-exonic sites 1.35 subs/site

This Article

  1. Genome Res. 13: 813-820

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