Spectral Biclustering of Microarray Data: Coclustering Genes and Conditions

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Figure 2.
Figure 2.

(a) The outer product of the sorted eigenvectors uand v of the 2nd eigenvalue of the equal row- and column-sum bistochastic-like matrix B applied to a dataset with three types of lymphoma: CLL (C), FL (F), and DLCL (D). Sorting of v orders the patients according to the different diseases. (b) As in (a), the 2nd singular value contribution to the biclustering method (C −1 A T R −1 A) of lymphoma CLL (C), FL (F), DLCL (D) partitioned the patients according to their disease, with one exception. We preselected all genes that had complete data along all experimental conditions (samples).

This Article

  1. Genome Res. 13: 703-716

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