


(A) CSH and r 2 from the simulated data set. Results are averaged over all haplotype regions of a given length, and over 200 replicates. (B) Coefficient of variation ofr 2 and CSH over all haplotype regions of the same length, across 200 replicates. (C) CSH from the data simulated with either an infinite alleles model or a stepwise mutation model. Results are averaged over all haplotype regions of a given length, and over 200 replicates.











