ESTs and Genes Within the 10p11 Sequence
| Region of identity (contig1), contig2 | GenBank acc. no/unigene cluster (No.) | % match | Features (repeat/ gene name ) | Genome origin (if not 10q11) |
| (30269-30688) | AL045218 | 99 | ||
| (65078-69657) | AI797613/Hs135840 (6) | 98 | 4q24 (ap001860) | |
| (70352-70426) | AI740992/Hs133165 (3) | 97 | 4q24 (ap001860) | |
| (184338-183720) | AW974557 | 98 | 2q11 (al445993) | |
| 48769-49073 | AI284091 | 98 | L1 | 1q42.11 (al365438) |
| 63525-72216 | AI971943 | 97 | 1p36.33 (ac004908) | |
| 85121-84555 | BE145230 | 97 | AluJo | Multiple, Subtelomeric. |
| 133098-132535 | AW499533 | 100 | ||
| 140359-140839 | AA195187 | 98 | AluSp | 4q26 (ac022702) |
| 173552-151404 | AW854054/Hs187579 (75) | 98 | HSD17B7Ψ | |
| 178360-177773 | AI799915/Hs15248 (164) | 99 | 1q23.3 (AC069037) | |
| 179950-180507 | AI927669/Hs42392 (39) | 99 | 1q23.3 (AL441926) | |
| 277316-277660 | AA593504/Hs162587 (1) | 97 | 1q43 (al360271) | |
| 294267-294626 | AW015485/Hs341696 (1) | 97 | 10p11.2 (al390956) | |
| 349457-349181 | AW856442 | 100 | HAL1 | |
| 351871-365253 | AA927631/Hs340030 (1) | 99 | ||
| 352513-352875 | AW072278 | 100 | L1PA8 | |
| 379608-379900 | AI637955/Hs224979 (4) | 99 | L2 | |
| 382137-382486 | AA680406/Hs126913 (4) | 99 | ||
| 385502-385916 | AW301129/Hs318978 (1) | 100 | ||
| 435627-406440 | X69115/Hs54488 (10) | 100 | ZNF37A | |
| 519524-469848 | X68687/Hs70617 | 100 | ZNF11/33A | |
| 553075-580039 | AK056452 | 100 | ZNF25 | |
| 672343-700930 | AJ492196 | 100 | ZNF248 | |
| 709987-710637 | BE387652/Hs57553 (181) | 98 | TLK2Ψ | |
| 700012-700440 | HS562273 | 100 | ||
| 754102-754795 | BE378519 | 99 | ||
| 785464-785056 | AI248257/Hs149302 (1) | 100 | ||
| 785930-785515 | AI991440 | 100 | ||
| 771258-770961 | AA923150/Hs148281 (1) | 100 | L1MC4 | |
| 1062408-1062674 | AA744917 | 100 | ||
| 1073813-1074078 | BE064203 | 100 | ||
| 1075595-1075848 | BE063630 | 99 | ||
| 1076792-1076582 | AI393188 | 100 | ||
| 1099274-1099737 | AA921809/Hs132449 (3) | 99 | ||
| 1100666-1101084 | BE063346 | 99 | ||
| 1101637-1101938 | AA725605/Hs293102 (2) | 100 | AluJ | |
| 1111674-1111962 | AI902319 | 100 | ||
| 1126559-1126868 | BE008091 | 100 | ||
| 1132040-1132647 | AI905942 | 100 | MER5A + 5B | |
| 1133889-1134201 | BE069326 | 100 | ||
| 1135128-1135707 | BE061064 | 100 | MIR | |
| 1138066-1139146 | BE072345 | 100 | L2 | |
| 1139874-1140174 | AI906585 | 100 | ||
| 1145135-1145244 | BE072230 | 100 | MLT1H1 | |
| 1147376-1147687 | AA632089 | 100 | ||
| 1149924-1150010 | AW175720 | 100 | MIR |
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ESTs were identified by using BLAST to query the Swissprot, TREMBL, Unigene, and dbEST databases. ESTs were defined as genes if they coincided with either ab initio gene predictions or protein similarity and an intact ORF. ESTs were defined as pseudogenes if they coincided with protein similarity and a disrupted ORF relative to the known protein. Details of gene fragments (similarity to part of known protein, no ESTs) can be found at http://www.ncl.ac.uk/ihg/10p11.htm . No consistent ab initio gene predictions were obtained in the absence of ESTs. The position of each feature within contig 1 (parenthesis) and 2 are shown, together with accession number and unigene cluster information. The % identity of the ESTs to 10p11 are also shown (% match over >80% of EST length). AA927631 (351871-365252) is the only anonymous EST which is spliced.
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↵Only two ESTs within the TLK2 cluster (BE367652,AV706880) are derived from the 10p11 pseudogene and only four ESTs from the HSD17B7 cluster (BG199997, BG189163, AI351558, BG182213) are derived from the 10p11 pseudogene.
